BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028G01LP1|AL428950
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig533 1768 0.0
>3x_Contig533
Length = 2268
Score = 1768 bits (892), Expect = 0.0
Identities = 906/908 (99%), Gaps = 2/908 (0%)
Strand = Plus / Plus
Query: 1 atcaaataccatttgcacattgacttctacaagccaattgatacggaaaactcggagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 atcaaataccatttgcacattgacttctacaagccaattgatacggaaaactcggagcag 936
Query: 61 agggtagctaacggtagaaactactttttggtgttaaggaagaaagatttaggccttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 agggtagctaacggtagaaactactttttggtgttaaggaagaaagatttaggccttgaa 996
Query: 121 tactggcccagattgaccaaggagaagcttaagtatcattacattaaaaccgactttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997 tactggcccagattgaccaaggagaagcttaagtatcattacattaaaaccgactttgat 1056
Query: 181 aaatgggttgacgaagatgaacaagaagagaatgttgctgctgataacgacttgatgtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 aaatgggttgacgaagatgaacaagaagagaatgttgctgctgataacgacttgatgtca 1116
Query: 241 caatttggccaaatggggggcgctggcttccctggaatggaacaaggtttcaatccacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1117 caatttggccaaatggggggcgctggcttccctggaatggaacaaggtttcaatccacaa 1176
Query: 301 gccttcgctgacgccggaatcaacctggatgaggcattaccagaagaagatgatgaagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1177 gccttcgctgacgccggaatcaacctggatgaggcattaccagaagaagatgatgaagat 1236
Query: 361 gacgaagaaaaagctgaataggtatgatcggatggtctgcaaaggcgatttctatcaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1237 gacgaagaaaaagctgaataggtatgatcggatggtctgcaaaggcgatttctatcaaga 1296
Query: 421 tttaattcatttatttgctgtatacagtcatgcgcatatataggtgtataaatacgaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 tttaattcatttatttgctgtatacagtcatgcgcatatataggtgtataaatacgaaca 1356
Query: 481 aaaatttctattatatattatg-atattgagcggctttgaataaaaagctatttagacct 539
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1357 aaaatttctattatatattatgcatattgagcggctttgaataaaaagctatttagacct 1416
Query: 540 tttggaacttcaattcatctttatacaaaatctgggaggcaacccagttttcgcctggtg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 tttggaacttcaattcatctttatacaaaatctgggaggcaacccagttttcgcctggtg 1476
Query: 600 ccaaaaccacgaaatcatgaacatgacctggttcgacacacaccatatttttaaacccat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1477 ccaaaaccacgaaatcatgaacatgacctggttcgacacacaccatatttttaaacccat 1536
Query: 660 cctttggttcaaaatctgccatacctttagatttttccacccacggattccaaacgacag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1537 cctttggttcaaaatctgccatacctttagatttttccacccacggattccaaacgacag 1596
Query: 720 tatctggtaggttgtgtcttttcaaggtatggattgggta-cccttatcgatcacttgga 778
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1597 tatctggtaggttgtgtcttttcaaggtatggattgggtaccccttatcgatcacttgga 1656
Query: 779 tgattctgtcttcgtcaacattttgataaattctatctaattcttcatgcacagaaatca 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1657 tgattctgtcttcgtcaacattttgataaattctatctaattcttcatgcacagaaatca 1716
Query: 839 caggttgtctgtcaatatagctttccttcaatagttgatcgtacaatttggtgctgctca 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1717 caggttgtctgtcaatatagctttccttcaatagttgatcgtacaatttggtgctgctca 1776
Query: 899 aattagaa 906
||||||||
Sbjct: 1777 aattagaa 1784
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8505
Number of Sequences: 1807
Number of extensions: 8505
Number of successful extensions: 121
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)